CDS

Accession Number TCMCG057C43471
gbkey CDS
Protein Id XP_018449525.1
Location complement(join(3563644..3563718,3564008..3564082,3564171..3564233,3564329..3564434,3564532..3564626,3564765..3564794,3564910..3564981,3565047..3565106,3565356..3565402,3565537..3565601,3565705..3565793,3565878..3565916,3566115..3566174,3566263..3566335,3566435..3566625,3566837..3566917,3567013..3567144,3567261..3567361,3567449..3567572,3567659..3567803,3567911..3568070,3568236..3568351,3568500..3568632,3568711..3568834))
Gene LOC108820978
GeneID 108820978
Organism Raphanus sativus

Protein

Length 751aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018594023.1
Definition PREDICTED: U3 small nucleolar RNA-associated protein 25 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description U3 small nucleolar RNA-associated protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14774        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034511        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTCCAACAAAGTCCAACGTACTGTCGAAGAGGCACAAACCACATGAGAAATTCGATAAGAAACGAGATACGAAGAAGGCTAAACTTGCTGAGAAGGCGGTTCCAACAGAGGAGGATCTAGATTCGTCTGAAGAAGAAGACACTATTGAGGAAGAACCAGAAGCAGTGGTTTACAGAAAACCGACAACGTACGATAATTTGCTGGCGTCTCTCGGTTCGTCTAACAAAGCTGTTGCTGATATGAACAAAAGAAGGCAGAGAGAGGAGGAAGGCAAAAGTGACACAGAAGGAGAGGAAGATGAGGAAGAGGATGATGACAGTGGGTCTGAGGATCAAATCTCTACAGACGAAGAGAATGATGAGATTCAAGGAGACGATCAGGAAAGTCTCGGAGGTCTTACTGACAACACAGAGAAGGAGAACGATGATAATCATAGCAAGGAAGAAGATTCTGACGATTATGAAACTGATGAGGAGCTTGATTTGAATACCAATGGCCAACCTTTAGTAGATGCTTCTTCATCTACTAGTGCATTTAGTGAGCACCTTAGTCACACATTATCAAGTGAACAAGTGAAAACCTTACCCGAAGGCAAGTGGAAATTTAAATGGGAAGCACCGGCCATTGACATGCCAAATTGCAAGTGGAAAGGAACTAGACAAAATTTCTTCGATGGTGTTCAGAGTGATGCACCTTATGACCTCAAGCCGAAGTTATTCAAGCACTGGCTTCAACTATACCAGAAATCTGGTGGAAAAGATTTTGACTCATCTAAAAGAAGAAGATTCTTCTCCATCTGCAACAGCTACCTGGATATTTTGCATTCTAACAAGAGACCCTTTTACAATAAAGGCCGTGAAGAAGACTCAAGTGCCATGGACGCTTATCTTATGCATTCTTTGAATCACATTTTTAAAACGAGAGATCTTGTGAAGAAGAATGAGAGTAAAATTGCAAAGCATCGAGAGACGTCTGAACAAGAAATTCTTTCTGATGATGGATTTCTTGACCAAGGATTTACTCGTCCAAAGGTTTTGATTCTACTACCGATGAGGAGTATTGCCTTTCGCGTTGTCAAGAGACTCATACAACTAACTCCAGAGGCTCAAAGGGTTAAGGTAGAACATCTTGACCGGTTTAATGCCGAGTTCGGATGTGAAGACGAATCCGATGACGATGATGAGAAGACATCCAAAAATGGGAAATCGACAGCCCACAAGTCTTCAAAACCTTCTGATTGGCAAGCCCTTTTTGGTGAGAAGAACAGTGATGATGAGTTTATGCTAGGCATTAAGCATACTAGAAAGAGCATTAGGCTGTATGGTGATTTCTATTCCTCGGACATGATTATTGCTTCCCCTCTCAAGTTACATATGGCCATTGGTCAAGCAGAAGAAAACAAGGAAAGGGATGTCGATTATCTCTCCTCCATTGAGGTTTTGGTTATCGATCATGCAGACATAATATCTATGCAGAATTGGTCGTTCCTTACTACAGTCGTCGACCACATAAATAGATTGCCATCAAAGCAGCATGGTACCAATGTCATGCGGATCCGGCCGTTGTATTTGGATGGACAGGCACGGTTCTACCGACAGTCAATAATTCTAAGTTCCTATTTAACCCCAGAGATGAATGGTCTATTCAATCGCCAATGCTTGAACTATAAAGGAAAGGTGAAGCTGGCGTGTGAATACAAAGGTGTTCTCGAGAAAGTGTTGCTCCCTGTCCGTCAGATTTATGAAAGATTTGATGCAGACTCCATGACCCAAGCAGACGATGCACGTCTTGAATATTTTACCAAAAAGATATTCCCGAAGATCAAAGATTCTTTTCAGGGAGGAGTAATGATCTTTATCCCTTCTTACTTCGATTTCGTAAGGCTCAGAAACTATCTGAAGTCGCAGAATGCCTCTTTCTGTCTTCTTGGAGACTACACAAAGAATGCAGACATATCCCGTGCACGAGAATGGTTTTTCGCAGGGAGCCGGAAGATCATGCTTTACACTGAGAGGGCATACTTCTATCGGAGATACAAGATCCGTGGCATAAAGAACTTGATATTCTACTCTCTTCCGGAGCGGAAGGAGTTTTACCCTGAGATTGTGAACATGCTTGATGAAGGATCGTATGACATGATGTCCACTGCACTTTTTTCTCGTTTTGATCTGCTTAAGATGGAAAGGATCGTAGGGACTGCTTCCGCAAAAAGAATGATCAGTTCTGATAAGAGCATCTTTGCTTTCTGTTAA
Protein:  
MAPTKSNVLSKRHKPHEKFDKKRDTKKAKLAEKAVPTEEDLDSSEEEDTIEEEPEAVVYRKPTTYDNLLASLGSSNKAVADMNKRRQREEEGKSDTEGEEDEEEDDDSGSEDQISTDEENDEIQGDDQESLGGLTDNTEKENDDNHSKEEDSDDYETDEELDLNTNGQPLVDASSSTSAFSEHLSHTLSSEQVKTLPEGKWKFKWEAPAIDMPNCKWKGTRQNFFDGVQSDAPYDLKPKLFKHWLQLYQKSGGKDFDSSKRRRFFSICNSYLDILHSNKRPFYNKGREEDSSAMDAYLMHSLNHIFKTRDLVKKNESKIAKHRETSEQEILSDDGFLDQGFTRPKVLILLPMRSIAFRVVKRLIQLTPEAQRVKVEHLDRFNAEFGCEDESDDDDEKTSKNGKSTAHKSSKPSDWQALFGEKNSDDEFMLGIKHTRKSIRLYGDFYSSDMIIASPLKLHMAIGQAEENKERDVDYLSSIEVLVIDHADIISMQNWSFLTTVVDHINRLPSKQHGTNVMRIRPLYLDGQARFYRQSIILSSYLTPEMNGLFNRQCLNYKGKVKLACEYKGVLEKVLLPVRQIYERFDADSMTQADDARLEYFTKKIFPKIKDSFQGGVMIFIPSYFDFVRLRNYLKSQNASFCLLGDYTKNADISRAREWFFAGSRKIMLYTERAYFYRRYKIRGIKNLIFYSLPERKEFYPEIVNMLDEGSYDMMSTALFSRFDLLKMERIVGTASAKRMISSDKSIFAFC